UniReD with New Features
How does UniRed work?
UniReD is a Text Mining tool that collects high quality, manually annotated and non-redundant Human or Mouse proteins from UniProtKB/Swiss-Prot (reviewed). Using a combination of publications that are i. manually assigned to each protein by UniProt and ii.automatically calculated (as related documents) by PubMed, UniReD creates clusters of proteins that are putatively functionally related.
When a user enters a query protein in UniRed, the results are all the clusters to which the protein belongs. The user can also study all the unique proteins of those clusters in a list form.
If you want to access the multiple UniReD where you can have functional relationship of multiple query proteins to a reference set of proteins please click here.
How does UniRed work?
UniReD is a Text Mining tool that collects high quality, manually annotated and non-redundant Human or Mouse proteins from UniProtKB/Swiss-Prot (reviewed). Using a combination of publications that are i. manually assigned to each protein by UniProt and ii.automatically calculated (as related documents) by PubMed, UniReD creates clusters of proteins that are putatively functionally related.
When a user enters a query protein in UniRed, the results are all the clusters to which the protein belongs. The user can also study all the unique proteins of those clusters in a list form.
Reference:
Theodosiou T, Papanikolaou N, Savvaki M, Bonetto G, Maxouri S, Fakoureli E, Eliopoulos AG, Tavernarakis N, Amoutzias GD, Pavlopoulos GA, Aivaliotis M, Nikoletopoulou V, Tzamarias D, Karagogeos D, Iliopoulos I. UniProt-Related Documents (UniReD): assisting wet lab biologists in their quest on finding novel counterparts in a protein network. NAR Genom Bioinform. 2020 Feb 11;2(1):lqaa005. doi: 10.1093/nargab/lqaa005. PMID: 33575553; PMCID: PMC7671407.
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